PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0060s0392.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family WRKY
Protein Properties Length: 582aa    MW: 62202.4 Da    PI: 6.9803
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0060s0392.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY962.7e-30346404259
                          --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                 WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                          +Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+++r+aed +++++tYeg+Hnh+
  Kaladp0060s0392.1.p 346 SDGCQWRKYGQKMAKGNPCPRAYYRCTMAvGCPVRKQIQRCAEDRTILVTTYEGNHNHP 404
                          7*********************************************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.3E-32330406IPR003657WRKY domain
SuperFamilySSF1182903.4E-27338406IPR003657WRKY domain
PROSITE profilePS5081129.356340406IPR003657WRKY domain
SMARTSM007741.2E-35345405IPR003657WRKY domain
PfamPF031061.1E-25347404IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 582 aa     Download sequence    Send to blast
MESTMRSEWK VASVVVDPDR YYSSSFFSNK PTVLNSLPIL TNYRAGGGDM FPIRRCGDLV  60
LEKPPVADRD CGGGDDDPDE SVKRVDVVDF FAERRFDDRS QSRDGCGLPV KRESSHGEAA  120
AAPLRELDVN TGLNLVMANR GSDESDDGSS ASDSKRAKIE LSQLQTELGR MTAENVKLKE  180
MLSHVSNNYE ALQLHMMSLM KQQQSSLQPE NGPEPKNGDH EKPAEKKHGV NAGLTEPRRF  240
LAIGRSGSGA ETDEVLSHSS SEDGTQSGSP QAAGKRPRGD SKKDNKMVAV REDSPNSDTQ  300
VWTADKPGNN TNPNTAKASI DQQSAEATMR KARVSVRARS EAPMISDGCQ WRKYGQKMAK  360
GNPCPRAYYR CTMAVGCPVR KQIQRCAEDR TILVTTYEGN HNHPLPPAAM SMASTTTAAA  420
AMLLSGSMSS ADGLMNPNFL ARAMLPACSS SMATISASAP FPTVTLDLTH TASPGPLQLQ  480
RPHLQAQFPG PIGSQILTSL PFITNALPQI FTQALHNQSK FSGLQVSQDD SINAVTAAIA  540
ADPSFTAAVA ATISSIISGG GANHSSNNNH NGSSITSIPP Q*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A1e-21332408176WRKY transcription factor 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002263115.11e-170PREDICTED: probable WRKY transcription factor 31
SwissprotQ9C5191e-133WRKY6_ARATH; WRKY transcription factor 6
TrEMBLF6H7H01e-170F6H7H0_VITVI; Putative uncharacterized protein
STRINGVIT_10s0116g01200.t011e-170(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G62300.11e-102WRKY family protein